CelLink.metrics.cell_type_matching_accuracy

CelLink.metrics.cell_type_matching_accuracy(m1_source_ct, m1_predict_ct, m2_source_ct, m2_predict_ct)

Calculate the cell-type prediction accuracy of cell-cell alignment.

Parameters:

• m1_source_ct (list) – The original cell type labels of modality 1.

• m1_predict_ct (list) – The predicted cell type labels of modality 1.

• m2_source_ct (list) – The original cell type labels of modality 2.

• m2_predict_ct (list) – The predicted cell type labels of modality 2.

Returns:

float – The overall cell-type prediction accuracy (rounded to 4 decimals).